ABOUT THIS RECORDspecies: Drosophila melanogaster
miRNA family: mir-1011
source: miRBase, original name: dme-mir-1011 (MI0005872)
Taxonomy by NCBI:
Drosophila melanogaster melanogaster subgroup melanogaster group Sophophora Drosophila Drosophiliti Drosophilina Drosophilini Drosophilinae Drosophilidae Ephydroidea Acalyptratae Schizophora Cyclorrhapha Eremoneura Muscomorpha Brachycera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTATTGGTTCAAATCGCTCGCAG miRNA* GTGAGTTTTTGAGCCAGGAATA mismatches: 4 bulges: 1 |
pre-miRNA
GTGAGTTTTTGAGCCAGGAATATAGTTCTTATTATTGGTTCAAATCGCTCGCAG
dot-bracket secondary structure
((((((.((((((((((.((((.......)))).))))))))))..))))))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: 454
references
[1] Ruby JG, Jan CH, Bartel DP, Nature. 448:83-86(2007)., "Intronic microRNA precursors that bypass Drosha processing"
GTGAGTTTTTGAGCCAGGAATATAGTTCTTATTATTGGTTCAAATCGCTCGCAG
dot-bracket secondary structure
((((((.((((((((((.((((.......)))).))))))))))..))))))..
SIMILARITIES| miRBase dsi-mir-1011: 7e-25 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
Identical with: dsi-mir-1011 from miRBase (MNEST037308) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: 454
references
[1] Ruby JG, Jan CH, Bartel DP, Nature. 448:83-86(2007)., "Intronic microRNA precursors that bypass Drosha processing"
