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ABOUT THIS RECORD
ID:
MNEST036598
species:
Drosophila melanogaster
miRNA family:
mir-1013
source:
miRBase, original name:
dme-mir-1013
(
MI0005874
)
Taxonomy by NCBI:
Drosophila melanogaster
melanogaster subgroup
melanogaster group
Sophophora
Drosophila
Drosophiliti
Drosophilina
Drosophilini
Drosophilinae
Drosophilidae
Ephydroidea
Acalyptratae
Schizophora
Cyclorrhapha
Eremoneura
Muscomorpha
Brachycera
Diptera
Endopterygota
Neoptera
Pterygota
Dicondylia
Insecta
Hexapoda
Pancrustacea
Mandibulata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATAAAAGTATGCCGAACTCG
miRNA*
AGTTTCGTACACTTAATTA
mismatches:
3
bulges:
1
View larger
pre-miRNA
GTG
AGTTTCGTACACTTAATTA
ATAGGATCGGCCGTTA
ATAAAAGTATGCCGAACTCG
CAG
dot-bracket secondary structure
(((
(((((.(((.((((.((((
((.((.....))))))
))..)))).))).)))))))
)..
SIMILARITIES
miRBase
dsi-mir-1013
:
5e-29
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
Identical with:
dsi-mir-1013
from miRBase (
MNEST037310
)
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
454
deep sequencing data evidence
references
[
1
] Ruby JG, Jan CH, Bartel DP,
Nature. 448:83-86(2007).
,
"Intronic microRNA precursors that bypass Drosha processing"