ABOUT THIS RECORDspecies: Drosophila pseudoobscura
miRNA family: mir-277
source: miRBase, original name: dps-mir-277 (MI0001335)
Taxonomy by NCBI:
Drosophila pseudoobscura pseudoobscura subgroup obscura group Sophophora Drosophila Drosophiliti Drosophilina Drosophilini Drosophilinae Drosophilidae Ephydroidea Acalyptratae Schizophora Cyclorrhapha Eremoneura Muscomorpha Brachycera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TAAATGCACTATCTGGTACGACA miRNA* CGTGTCAGGAGTGCATTTGCA mismatches: 2 bulges: 2 |
pre-miRNA
TTGAAGGTTTTGGGTTGCGTGTCAGGAGTGCATTTGCACTGAAACATTCTGAAGCTTGTAAATGCACTATCTGGTACGACATTCCAGAACGTACAATCTT
dot-bracket secondary structure
(((.(.(((((((..(((((..((((((((((((((((((............))..)))))))))))).))))..))).))..))))))).).)))....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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TTGAAGGTTTTGGGTTGCGTGTCAGGAGTGCATTTGCACTGAAACATTCTGAAGCTTGTAAATGCACTATCTGGTACGACATTCCAGAACGTACAATCTT
dot-bracket secondary structure
(((.(.(((((((..(((((..((((((((((((((((((............))..)))))))))))).))))..))).))..))))))).).)))....
SIMILARITIES| miRBase dpe-mir-277: 8e-51 PMRD no hits microPC no hits | UniProt no hits RFAM mir-277: 1e-40 |
Identical with: dpe-mir-277 from miRBase (MNEST036871) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
