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ABOUT THIS RECORD

ID: MNEST036955
species: Drosophila pseudoobscura
miRNA family: mir-46
source: miRBase, original name: dps-mir-281-1 (MI0001339)

Taxonomy by NCBI:
Drosophila pseudoobscura pseudoobscura subgroup obscura group Sophophora Drosophila Drosophiliti Drosophilina Drosophilini Drosophilinae Drosophilidae Ephydroidea Acalyptratae Schizophora Cyclorrhapha Eremoneura Muscomorpha Brachycera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGTCATGGAATTGCTCTCTTTGT

miRNA*
AAAGAGAGCTGTCCGTCGACAGT

mismatches: 2
bulges: 2

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pre-miRNA
CGAATAGGTGAATAAAGAGAGCTGTCCGTCGACAGTCAACGTACCAATTTAATACTGTCATGGAATTGCTCTCTTTGTATAATATTCG

dot-bracket secondary structure
((((((..((.(((((((((((..(((((.((((((.................)))))))))))...))))))))))).)).))))))


SIMILARITIES
miRBase dpe-mir-281-1: 7e-45

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-46: 0.00007

Identical with: dpe-mir-281-1 from miRBase (MNEST036875)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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