miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
ABOUT THIS RECORD
ID:
MNEST037573
species:
Nasonia giraulti
miRNA family:
mir-14
source:
miRBase, original name:
ngi-mir-14
(
MI0016630
)
Taxonomy by NCBI:
Nasonia giraulti
Nasonia
Pteromalinae
Pteromalidae
Chalcidoidea
Chaldicoidea group
Apocrita
Hymenoptera
Endopterygota
Neoptera
Pterygota
Dicondylia
Insecta
Hexapoda
Pancrustacea
Mandibulata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCAGTCTTTTTCTCTCTCCTA
miRNA*
GGGGTGAGAAACTGGCTTGGCT
mismatches:
3
bulges:
1
View larger
pre-miRNA
TCGCTCGGTCAGTG
GGGGTGAGAAACTGGCTTGGCT
ATGTACTCCCCATTGTGGACAG
TCAGTCTTTTTCTCTCTCCTA
TTGGC
dot-bracket secondary structure
.......(((((((
((((.((((((..((((.((((
.(.(((........))).).))
))))))..)))))).))))))
)))))
SIMILARITIES
miRBase
nvi-mir-14
:
2e-42
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-14: 0.000004
Identical with:
nvi-mir-14
from miRBase (
MNEST037641
)
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
references
[
1
] Sathyamurthy G, Swamy NR,
Int J Insect Sci. 2:1-13(2010).
,
"Computational Identification and Characterization of Putative miRNAs in Nasonia Species"