ABOUT THIS RECORDspecies: Nasonia giraulti
miRNA family: mir-932
source: miRBase, original name: ngi-mir-932 (MI0016645)
Taxonomy by NCBI:
Nasonia giraulti Nasonia Pteromalinae Pteromalidae Chalcidoidea Chaldicoidea group Apocrita Hymenoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCAATTCCGTAGTGCATTGCAG miRNA* GCAAGCACCGCGGGAGTGAGG mismatches: 3 bulges: 1 |
pre-miRNA
CGCGTTGCCTCTTCAATTCCGTAGTGCATTGCAGTAGATTTAAAAGAAAGATTCTGCAAGCACCGCGGGAGTGAGGCGGCTTCGTGTC
dot-bracket secondary structure
((((..(((.(((((.(((((..((((.((((((..(((((.......)))))))))))))))..))))).))))).)))..))))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Sathyamurthy G, Swamy NR, Int J Insect Sci. 2:1-13(2010)., "Computational Identification and Characterization of Putative miRNAs in Nasonia Species"
CGCGTTGCCTCTTCAATTCCGTAGTGCATTGCAGTAGATTTAAAAGAAAGATTCTGCAAGCACCGCGGGAGTGAGGCGGCTTCGTGTC
dot-bracket secondary structure
((((..(((.(((((.(((((..((((.((((((..(((((.......)))))))))))))))..))))).))))).)))..))))..
SIMILARITIES| miRBase nlo-mir-932: 7e-45 PMRD no hits microPC no hits | UniProt no hits RFAM mir-932: 1e-43 |
Identical with: nlo-mir-932 from miRBase (MNEST037626) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Sathyamurthy G, Swamy NR, Int J Insect Sci. 2:1-13(2010)., "Computational Identification and Characterization of Putative miRNAs in Nasonia Species"
