ABOUT THIS RECORDspecies: Nasonia giraulti
miRNA family: mir-iab-8
source: miRBase, original name: ngi-mir-iab-8 (MI0016624)
Taxonomy by NCBI:
Nasonia giraulti Nasonia Pteromalinae Pteromalidae Chalcidoidea Chaldicoidea group Apocrita Hymenoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTACGTATACTGAAGGTATACCG miRNA* GATACATTCAGTATACGT mismatches: 4 bulges: 1 |
pre-miRNA
TGTTACGTATACTGAAGGTATACCGGACAGAAATACACTCAGGATACATTCAGTATACGT
dot-bracket secondary structure
....((((((((((((.((((.((.((...........)).)))))).))))))))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Sathyamurthy G, Swamy NR, Int J Insect Sci. 2:1-13(2010)., "Computational Identification and Characterization of Putative miRNAs in Nasonia Species"
TGTTACGTATACTGAAGGTATACCGGACAGAAATACACTCAGGATACATTCAGTATACGT
dot-bracket secondary structure
....((((((((((((.((((.((.((...........)).)))))).))))))))))))
SIMILARITIES| miRBase ame-mir-iab-4: 2e-28 PMRD no hits microPC no hits | UniProt no hits RFAM mir-iab-4: 2e-22 |
Identical with: ngi-mir-iab-4 from miRBase (MNEST037598) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Sathyamurthy G, Swamy NR, Int J Insect Sci. 2:1-13(2010)., "Computational Identification and Characterization of Putative miRNAs in Nasonia Species"
