ABOUT THIS RECORD

ID: MNEST037777
species: Tribolium castaneum
miRNA family: mir-279
source: miRBase, original name: tca-mir-279d (MI0016342)

Taxonomy by NCBI:
Tribolium castaneum Tribolium Tenebrionidae Tenebrionoidea Cucujiformia Polyphaga Coleoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE

pre-miRNA
ATCAAGAGTGGCCCCAAAAACCAATGAAAACACTGTGTTGGCGATTGTGGGTTTAGTCCACGTTTTAGTAAACCGTGACTAGATCCATACTCGTCTATAG
AGGTTTTTAGCACGACTTGGGCCCCACAAGCCAACTCCTCCA

dot-bracket secondary structure
.....((((((((((((.......(((((((.((.(((.(((((.(((((((((((((.((((((....))).)))))))))))))))).))))).))).
))))))))).......)))))........))).)))).....


SIMILARITIES

miRBase tca-mir-279d: 7e-77 PMRD no hits microPC no hits

UniProt no hits RFAM no hits

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: SOLID

references
[1] Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S, Genome Biol Evol. 2:686-696(2010)., "Functional shifts in insect microRNA evolution"