ABOUT THIS RECORDspecies: Tribolium castaneum
miRNA family: mir-315
source: miRBase, original name: tca-mir-315 (MI0010590)
Taxonomy by NCBI:
Tribolium castaneum Tribolium Tenebrionidae Tenebrionoidea Cucujiformia Polyphaga Coleoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTTTGATTGTTGCTCAGAAAGC miRNA* TTTCGGGCAATAATCATTTCC mismatches: 3 bulges: 1 |
pre-miRNA
CGTTCCTTTTGCTTTTGATTGTTGCTCAGAAAGCCGGGTGTTAGAAAGGCTTTCGGGCAATAATCATTTCCAAAGAGGAC
dot-bracket secondary structure
)..(((((((.....((((((((((((.(((((((............)))))))))))))))))))......))))))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Griffiths-Jones S, Unpublished (2009).,
CGTTCCTTTTGCTTTTGATTGTTGCTCAGAAAGCCGGGTGTTAGAAAGGCTTTCGGGCAATAATCATTTCCAAAGAGGAC
dot-bracket secondary structure
)..(((((((.....((((((((((((.(((((((............)))))))))))))))))))......))))))).
SIMILARITIES| miRBase ame-mir-315: 6.0E-8 PMRD no hits microPC no hits | UniProt no hits RFAM 5mir-315: 1.0E-37 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Griffiths-Jones S, Unpublished (2009).,
