ABOUT THIS RECORDspecies: Tribolium castaneum
miRNA family: mir-981
source: miRBase, original name: tca-mir-981 (MI0010592)
Taxonomy by NCBI:
Tribolium castaneum Tribolium Tenebrionidae Tenebrionoidea Cucujiformia Polyphaga Coleoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTCGTTGTCGACGAAACCTGCA miRNA* CGGGTTTCGGGGCATCGGAACC mismatches: 5 bulges: 2 |
pre-miRNA
TACAAGACTTATATCTCATAAGTTACGGGTTTCGGGGCATCGGAACCGATTTTAAGCTGGTTCGTTGTCGACGAAACCTGCAGACTATGGGACACA
dot-bracket secondary structure
.............(((((((.(((.(((((((((.((((...((((((.........))))))..))))..)))))))))..))))))))))....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Griffiths-Jones S, Unpublished (2009).,
TACAAGACTTATATCTCATAAGTTACGGGTTTCGGGGCATCGGAACCGATTTTAAGCTGGTTCGTTGTCGACGAAACCTGCAGACTATGGGACACA
dot-bracket secondary structure
.............(((((((.(((.(((((((((.((((...((((((.........))))))..))))..)))))))))..))))))))))....
SIMILARITIES| miRBase dpu-mir-981: 0.000005 PMRD no hits microPC no hits | UniProt no hits RFAM mir-981: 0.00008 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Griffiths-Jones S, Unpublished (2009).,
