ABOUT THIS RECORDspecies: Brugia malayi
miRNA family: mir-25
source: miRBase, original name: bma-mir-92 (MI0013337)
Taxonomy by NCBI:
Brugia malayi Brugia Onchocercidae Filarioidea Spirurida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TATTGCACTCGTCCCGGCCT miRNA* GTCGAGTCGTTTGCACTATT mismatches: 5 bulges: 0 |
pre-miRNA
CATACTGCACTAATCAGTCAGGTCGAGTCGTTTGCACTATTCAGACAGAAGTTCATCATTTGGCGATATTGCACTCGTCCCGGCCTGAGTGTTAGCTGCT
ATTAT
dot-bracket secondary structure
......(((((((.((.((((((((.(.((..((((.((((....((((.(.....).))))..)))).))))..)).).)))))))).)))))).))).
.....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Poole CB, Davis PJ, Jin J, McReynolds LA, Mol Biochem Parasitol. 169:87-94(2010)., "Cloning and bioinformatic identification of small RNAs in the filarial nematode, Brugia malayi"
CATACTGCACTAATCAGTCAGGTCGAGTCGTTTGCACTATTCAGACAGAAGTTCATCATTTGGCGATATTGCACTCGTCCCGGCCTGAGTGTTAGCTGCT
ATTAT
dot-bracket secondary structure
......(((((((.((.((((((((.(.((..((((.((((....((((.(.....).))))..)))).))))..)).).)))))))).)))))).))).
.....
SIMILARITIES| miRBase xbo-mir-92a: 0.000005 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Poole CB, Davis PJ, Jin J, McReynolds LA, Mol Biochem Parasitol. 169:87-94(2010)., "Cloning and bioinformatic identification of small RNAs in the filarial nematode, Brugia malayi"
