miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST038116
species: Brugia malayi
miRNA family: mir-133
source: miRBase, original name: bma-mir-133 (MI0013343)

Taxonomy by NCBI:
Brugia malayi Brugia Onchocercidae Filarioidea Spirurida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTGGTCCCCTTCAACCAGCTA

miRNA*
CCTGGTTGTAGTCGAACCAAAT

mismatches: 4
bulges: 1

View larger
pre-miRNA
TTGATTGGACAAGGTATGCTATGACGGACATTTACATACCTGGTTGTAGTCGAACCAAATTGTTATATTTTTAAAATCAATTGGTCCCCTTCAACCAGCT
A
TGTTTCTCCTCCTGTAAACATCTAGTTAA


dot-bracket secondary structure
.((((((((....((.(((...((.(((.....(((((.(((((((.((..((.((((.(((...............)))))))))..)).))))))).)
)
)))...)))))..))).)).)))))))).



SIMILARITIES
miRBase aae-mir-133: 0.000006

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-133: 8e-46

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record

references

[1] Poole CB, Davis PJ, Jin J, McReynolds LA, Mol Biochem Parasitol. 169:87-94(2010)., "Cloning and bioinformatic identification of small RNAs in the filarial nematode, Brugia malayi"




Liczniki na strone;