ABOUT THIS RECORDspecies: Brugia malayi
miRNA family: mir-8
source: miRBase, original name: bma-mir-236 (MI0013347)
Taxonomy by NCBI:
Brugia malayi Brugia Onchocercidae Filarioidea Spirurida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TAATACTGTCAGGTAATGACGAT miRNA* CGTCTTACCTGAACACTATTAGA mismatches: 1 bulges: 2 |
pre-miRNA
GAATGGCTGTCGTCTTACCTGAACACTATTAGAGTGTCATATGAAATATCTAATACTGTCAGGTAATGACGATTGCC
dot-bracket secondary structure
....(((.((((((((((((((.((.(((((((...((....))....))))))).)))))))))).)))))).)))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Poole CB, Davis PJ, Jin J, McReynolds LA, Mol Biochem Parasitol. 169:87-94(2010)., "Cloning and bioinformatic identification of small RNAs in the filarial nematode, Brugia malayi"
GAATGGCTGTCGTCTTACCTGAACACTATTAGAGTGTCATATGAAATATCTAATACTGTCAGGTAATGACGATTGCC
dot-bracket secondary structure
....(((.((((((((((((((.((.(((((((...((....))....))))))).)))))))))).)))))).)))
SIMILARITIES| miRBase crm-mir-236: 0.0000009 PMRD no hits microPC no hits | UniProt no hits RFAM mir-8: 0.0002 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Poole CB, Davis PJ, Jin J, McReynolds LA, Mol Biochem Parasitol. 169:87-94(2010)., "Cloning and bioinformatic identification of small RNAs in the filarial nematode, Brugia malayi"
