ABOUT THIS RECORDspecies: Brugia malayi
miRNA family: mir-46
source: miRBase, original name: bma-mir-281 (MI0013349)
Taxonomy by NCBI:
Brugia malayi Brugia Onchocercidae Filarioidea Spirurida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGTCATGGAATTGCTCTCTTTA miRNA* AAGAGAGCCATCTGTTGACAGT mismatches: 3 bulges: 2 |
pre-miRNA
GGTGAACGCAGACGACAAAGAGAGCCATCTGTTGACAGTCATATATTGCAACTGTCATGGAATTGCTCTCTTTACATGCCTGTGTTCTAAG
dot-bracket secondary structure
...((((((((.((..(((((((((..(((((.((((((((.....))..)))))))))))...)))))))))...)).))))))))....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Poole CB, Davis PJ, Jin J, McReynolds LA, Mol Biochem Parasitol. 169:87-94(2010)., "Cloning and bioinformatic identification of small RNAs in the filarial nematode, Brugia malayi"
GGTGAACGCAGACGACAAAGAGAGCCATCTGTTGACAGTCATATATTGCAACTGTCATGGAATTGCTCTCTTTACATGCCTGTGTTCTAAG
dot-bracket secondary structure
...((((((((.((..(((((((((..(((((.((((((((.....))..)))))))))))...)))))))))...)).))))))))....
SIMILARITIES| miRBase aae-mir-281: 0.000001 PMRD no hits microPC no hits | UniProt no hits RFAM mir-46: 4e-31 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Poole CB, Davis PJ, Jin J, McReynolds LA, Mol Biochem Parasitol. 169:87-94(2010)., "Cloning and bioinformatic identification of small RNAs in the filarial nematode, Brugia malayi"
