ABOUT THIS RECORDspecies: Caenorhabditis elegans
source: miRBase, original name: cel-mir-257 (MI0000334)
Taxonomy by NCBI:
Caenorhabditis elegans Caenorhabditis Peloderinae Rhabditidae Rhabditoidea Rhabditida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GAGTATCAGGAGTACCCAGTGA miRNA* CTGCAGTTCTTCCATGATGTACTCAG mismatches: 2 bulges: 6 |
pre-miRNA
ATAATATTTCCCGCTGAGTATCAGGAGTACCCAGTGATCGCCTTCACATATTGGGAAGAAGTATGTGATTGCGTCCTGCAGTTCTTCCATGATGTACTCA
GG
dot-bracket secondary structure
.............((((((((((((((.((.(((.((.(((..(((((((((.......)))))))))..))))))))..))..)))).)))..))))))
).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Ambros V, Lee RC, Lavanway A, Williams PT, Jewell D, Curr Biol. 13:807-818(2003)., "MicroRNAs and other tiny endogenous RNAs in C. elegans"
ATAATATTTCCCGCTGAGTATCAGGAGTACCCAGTGATCGCCTTCACATATTGGGAAGAAGTATGTGATTGCGTCCTGCAGTTCTTCCATGATGTACTCA
GG
dot-bracket secondary structure
.............((((((((((((((.((.(((.((.(((..(((((((((.......)))))))))..))))))))..))..)))).)))..))))))
).
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Ambros V, Lee RC, Lavanway A, Williams PT, Jewell D, Curr Biol. 13:807-818(2003)., "MicroRNAs and other tiny endogenous RNAs in C. elegans"
