miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST038373
species: Caenorhabditis elegans
miRNA family: mir-266
source: miRBase, original name: cel-mir-269 (MI0000349)

Taxonomy by NCBI:
Caenorhabditis elegans Caenorhabditis Peloderinae Rhabditidae Rhabditoidea Rhabditida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GGCAAGACTCTGGCAAAACT

miRNA*
TTTGACCCAACTCTTGTCAA

mismatches: 4
bulges: 2

View larger
pre-miRNA
GGGCAAAAGTTGGGCAAGACTCTGGCAAAACTTGGATTTATGCTGCGCCAAAGTTTAACCCAAGTTTGACCCAACTCTTGTCAAATTTTTGTCC

dot-bracket secondary structure
(((((((((((.(((((((...(((..((((((((.((...(((.......)))..)).))))))))...)))..))))))).)))))))))))


SIMILARITIES
miRBase cel-mir-266: 0.0000000003

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: PCR

references

[1] Grad Y, Aach J, Hayes GD, Reinhart BJ, Church GM, Ruvkun G, Kim J, Mol Cell. 11:1253-1263(2003)., "Computational and experimental identification of C. elegans microRNAs"




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