ABOUT THIS RECORDspecies: Caenorhabditis elegans
miRNA family: mir-2214
source: miRBase, original name: cel-mir-2214 (MI0010964)
Taxonomy by NCBI:
Caenorhabditis elegans Caenorhabditis Peloderinae Rhabditidae Rhabditoidea Rhabditida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CATTGACAACAACTTGACCGGCGTT miRNA* ATTCGGTCCGGAGTCAATGGG mismatches: 6 bulges: 4 |
pre-miRNA
ATTCGGTCCGGAGTCAATGGGTTATCTTTCAAAACCCCCCATTGACAACAACTTGACCGGCGTT
dot-bracket secondary structure
..((((((.((.(((((((((................))))))))).....)).))))))....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Kato M, de Lencastre A, Pincus Z, Slack FJ, Genome Biol. 10:R54(2009)., "Dynamic expression of small non-coding RNAs, including novel microRNAs and piRNAs/21U-RNAs, during Caenorhabditis elegans development"
ATTCGGTCCGGAGTCAATGGGTTATCTTTCAAAACCCCCCATTGACAACAACTTGACCGGCGTT
dot-bracket secondary structure
..((((((.((.(((((((((................))))))))).....)).))))))....
SIMILARITIES| miRBase cbr-mir-2214: 0.0000007 PMRD no hits microPC no hits | UniProt no hits RFAM ceN74-2: 2e-29 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: Solexa
references
[1] Kato M, de Lencastre A, Pincus Z, Slack FJ, Genome Biol. 10:R54(2009)., "Dynamic expression of small non-coding RNAs, including novel microRNAs and piRNAs/21U-RNAs, during Caenorhabditis elegans development"
