miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST038454
species:
Caenorhabditis elegans
source:
miRBase, original name:
cel-mir-4807
(
MI0017537
)
Taxonomy by NCBI:
Caenorhabditis elegans
Caenorhabditis
Peloderinae
Rhabditidae
Rhabditoidea
Rhabditida
Chromadorea
Nematoda
Pseudocoelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AAATGCGACTTCTGGGCTTACAG
miRNA*
GTGAGTTCAAAGTTACATTTTC
mismatches:
4
bulges:
1
View larger
pre-miRNA
GTGAGTTCAAAGTTACATTTTC
AATATATCTATTTTGA
AAATGCGACTTCTGGGCTTACAG
dot-bracket secondary structure
(((((((((((((..(((((((
((..........))))
)))))..)))).)))))))))..
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
Solexa
references
[
1
] Jan CH, Friedman RC, Ruby JG, Bartel DP,
Nature. 469:97-101(2011).
,
"Formation, regulation and evolution of Caenorhabditis elegans 3'UTRs"