ABOUT THIS RECORDspecies: Caenorhabditis elegans
source: miRBase, original name: cel-mir-4930 (MI0017716)
Taxonomy by NCBI:
Caenorhabditis elegans Caenorhabditis Peloderinae Rhabditidae Rhabditoidea Rhabditida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGCTGCCTAGGGGGCTGGCTAG miRNA* GGGGCTGGCTAGGGCTGCCTA mismatches: 5 bulges: 3 |
pre-miRNA
GTCTGCCTAGGGGGCTGGCTAGGGCTGCCTAGGGGGCTGGCTAGGGCTGCCTAGGGGCTGGCTGCCTAGGGGCTGGCTAGGGCTGCCTAGGGGCTGGCTA
GGGTAGGCTT
dot-bracket secondary structure
((((((((....(((..(((.((((.((((....(((..(((.((((.(((........))).))))...)))..))).)))).))))...)))..))).
))))))))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: 454
references
[1] de Lencastre A, Pincus Z, Zhou K, Kato M, Lee SS, Slack FJ, Curr Biol. 20:2159-2168(2010)., "MicroRNAs both promote and antagonize longevity in C. elegans"
GTCTGCCTAGGGGGCTGGCTAGGGCTGCCTAGGGGGCTGGCTAGGGCTGCCTAGGGGCTGGCTGCCTAGGGGCTGGCTAGGGCTGCCTAGGGGCTGGCTA
GGGTAGGCTT
dot-bracket secondary structure
((((((((....(((..(((.((((.((((....(((..(((.((((.(((........))).))))...)))..))).)))).))))...)))..))).
))))))))..
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: 454
references
[1] de Lencastre A, Pincus Z, Zhou K, Kato M, Lee SS, Slack FJ, Curr Biol. 20:2159-2168(2010)., "MicroRNAs both promote and antagonize longevity in C. elegans"
