ABOUT THIS RECORDspecies: Caenorhabditis elegans
source: miRBase, original name: cel-mir-4934 (MI0017720)
Taxonomy by NCBI:
Caenorhabditis elegans Caenorhabditis Peloderinae Rhabditidae Rhabditoidea Rhabditida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGCCGAGCTTCTGTCTAGATG miRNA* TCTTCATTTTCGAATTCCGCGGCAAA mismatches: 7 bulges: 5 |
pre-miRNA
ATTTAATTCTAAAAATCATTTCTGACTGTTGGCCTCTTCATTTTCGAATTCCGCGGCAAAAAAGCAGTGCCGAGCTTCTGTCTAGATGTCTGCGTCATTT
TGTGATAGCT
dot-bracket secondary structure
..............(((((...((((.((.(((.(((..((....(((.....(((((.........)))))...))).))..))).))).))))))...
.)))))....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: 454
references
[1] de Lencastre A, Pincus Z, Zhou K, Kato M, Lee SS, Slack FJ, Curr Biol. 20:2159-2168(2010)., "MicroRNAs both promote and antagonize longevity in C. elegans"
ATTTAATTCTAAAAATCATTTCTGACTGTTGGCCTCTTCATTTTCGAATTCCGCGGCAAAAAAGCAGTGCCGAGCTTCTGTCTAGATGTCTGCGTCATTT
TGTGATAGCT
dot-bracket secondary structure
..............(((((...((((.((.(((.(((..((....(((.....(((((.........)))))...))).))..))).))).))))))...
.)))))....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: 454
references
[1] de Lencastre A, Pincus Z, Zhou K, Kato M, Lee SS, Slack FJ, Curr Biol. 20:2159-2168(2010)., "MicroRNAs both promote and antagonize longevity in C. elegans"
