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ABOUT THIS RECORD

ID: MNEST038852
species: Lottia gigantea
miRNA family: mir-9
source: miRBase, original name: lgi-mir-9 (MI0010105)

Taxonomy by NCBI:
Lottia gigantea Lottia Lottiidae Acmaeioidea Nacellina Docoglossa Eogastropoda Gastropoda Mollusca Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCTTTGGTTATCTAGCTGTATGA

miRNA*
ATAAAGCTAGGTTACCAAAGGCA

mismatches: 2
bulges: 0

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pre-miRNA
AAGTGAAAGCTCTGTTTTTGTCTTTGGTTATCTAGCTGTATGATTGAAATAGAAACATTATAAAGCTAGGTTACCAAAGGCAAAAATGGTGACTATACTC
TA


dot-bracket secondary structure
.((((....(.(((((((((((((((((.((((((((.((((((............)))))).)))))))).))))))))))))))))).)....)))).
..



SIMILARITIES
miRBase lgi-mir-79: 5e-52

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-9: 0.0000000004

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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references

[1] Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ, Evol Dev. 11:50-68(2009)., "The deep evolution of metazoan microRNAs"




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