ABOUT THIS RECORDspecies: Lottia gigantea
source: miRBase, original name: lgi-mir-2722 (MI0012169)
Taxonomy by NCBI:
Lottia gigantea Lottia Lottiidae Acmaeioidea Nacellina Docoglossa Eogastropoda Gastropoda Mollusca Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGGCGCCGTGGAAACATCTACC miRNA* GAGGTGTTTCATAGGCGCTACA mismatches: 5 bulges: 0 |
pre-miRNA
GTTGACCCCACTGGAGAGGTGTTTCATAGGCGCTACAGTGGAAGTGACGTGGCGCCGTGGAAACATCTACCTAGTGCGGTTGTA
dot-bracket secondary structure
...((((.((((((..(((((((((...((((((((.((.......))))))))))...)))))))))..)))))).))))...
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: 454
references
[1] Sperling EA, Vinther J, Moy VN, Wheeler BM, Semon M, Briggs DE, Peterson KJ, Proc Biol Sci. 276:4315-4322(2009)., "MicroRNAs resolve an apparent conflict between annelid systematics and their fossil record"
GTTGACCCCACTGGAGAGGTGTTTCATAGGCGCTACAGTGGAAGTGACGTGGCGCCGTGGAAACATCTACCTAGTGCGGTTGTA
dot-bracket secondary structure
...((((.((((((..(((((((((...((((((((.((.......))))))))))...)))))))))..)))))).))))...
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: 454
references
[1] Sperling EA, Vinther J, Moy VN, Wheeler BM, Semon M, Briggs DE, Peterson KJ, Proc Biol Sci. 276:4315-4322(2009)., "MicroRNAs resolve an apparent conflict between annelid systematics and their fossil record"
