ABOUT THIS RECORDspecies: Echinococcus granulosus
miRNA family: mir-124
source: miRBase, original name: egr-mir-124a (MI0017785)
SEQUENCE & STRUCTURE| miRNA TAAGGCACGCGGTGAATGCCA miRNA* GCGTTCAACCTCGGAGCCTTTGT mismatches: 3 bulges: 2 |
pre-miRNA
TGTCAAGCACGTGAAATGGCGTTCAACCTCGGAGCCTTTGTCAGCGATTGAATTAAGGCACGCGGTGAATGCCAAATGCGATGCTCC
dot-bracket secondary structure
.....((((((((...(((((((((.((.((..(((((..((((...))))...))))).)).)))))))))))..)))).))))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Cucher M, Prada L, Mourglia-Ettlin G, Dematteis S, Camicia F, Asurmendi S, Rosenzvit M, Int J Parasitol. 41:439-448(2011)., "Identification of Echinococcus granulosus microRNAs and their expression in different life cycle stages and parasite genotypes"
TGTCAAGCACGTGAAATGGCGTTCAACCTCGGAGCCTTTGTCAGCGATTGAATTAAGGCACGCGGTGAATGCCAAATGCGATGCTCC
dot-bracket secondary structure
.....((((((((...(((((((((.((.((..(((((..((((...))))...))))).)).)))))))))))..)))).))))..
SIMILARITIES| miRBase emu-mir-124a: 3e-44 PMRD no hits microPC no hits | UniProt no hits RFAM mir-124: 0.000001 |
Identical with: emu-mir-124a from miRBase (MNEST038943) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Cucher M, Prada L, Mourglia-Ettlin G, Dematteis S, Camicia F, Asurmendi S, Rosenzvit M, Int J Parasitol. 41:439-448(2011)., "Identification of Echinococcus granulosus microRNAs and their expression in different life cycle stages and parasite genotypes"
