miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST039244
species:
Nematostella vectensis
miRNA family:
mir-99
source:
miRBase, original name:
nve-mir-100
(
MI0010144
)
Taxonomy by NCBI:
Nematostella vectensis
Nematostella
Edwardsiidae
Actiniaria
Hexacorallia
Anthozoa
Cnidaria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GACCCGTAGATCCGAACTTGTG
miRNA*
CAGGCTCGTTTCTACGGATCAA
mismatches:
4
bulges:
0
View larger
pre-miRNA
TAATCGCACAGTATC
GACCCGTAGATCCGAACTTGTG
GAGTTTCACCA
CAGGCTCGTTTCTACGGATCAA
AACTGCGTCGAAAT
dot-bracket secondary structure
...((((.((((...
((.(((((((..(((.((((((
(.......)))
)))).)))..))))))).))..
.)))).).)))...
SIMILARITIES
miRBase
api-mir-100
:
0.000004
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-10: 1e-31
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
454
references
[
1
] Grimson A, Srivastava M, Fahey B, Woodcroft BJ, Chiang HR, King N, Degnan BM, Rokhsar DS, Bartel DP,
Nature. 455:1193-1197(2008).
,
"Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals"
[
2
] Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ,
Evol Dev. 11:50-68(2009).
,
"The deep evolution of metazoan microRNAs"