miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST039245
species:
Nematostella vectensis
source:
miRBase, original name:
nve-mir-2022
(
MI0010263
)
Taxonomy by NCBI:
Nematostella vectensis
Nematostella
Edwardsiidae
Actiniaria
Hexacorallia
Anthozoa
Cnidaria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTTGCTAGTTGCTTTTGTCCCGC
miRNA*
GGGATAAATCAACTGTCAAGTG
mismatches:
3
bulges:
1
View larger
pre-miRNA
AGATCGCCTGAAAGTC
GGGATAAATCAACTGTCAAGTG
GTTGTCA
TTTGCTAGTTGCTTTTGTCCCGC
CTTTTCT
dot-bracket secondary structure
.........(((((.(
((((((((.((((((.((((((
.....))
)))).))))))..))))))))).
)))))..
SIMILARITIES
miRBase
hma-mir-2022
:
0.00001
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
454
references
[
1
] Grimson A, Srivastava M, Fahey B, Woodcroft BJ, Chiang HR, King N, Degnan BM, Rokhsar DS, Bartel DP,
Nature. 455:1193-1197(2008).
,
"Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals"
[
2
] Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ,
Evol Dev. 11:50-68(2009).
,
"The deep evolution of metazoan microRNAs"