ABOUT THIS RECORDspecies: Nematostella vectensis
miRNA family: mir-2024
source: miRBase, original name: nve-mir-2024g-1 (MI0010293)
Taxonomy by NCBI:
Nematostella vectensis Nematostella Edwardsiidae Actiniaria Hexacorallia Anthozoa Cnidaria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TAACACAGTACCGATATTGTGA miRNA* AAAATATCGGTGTTGGGTAAA mismatches: 3 bulges: 1 |
pre-miRNA
ACCAATAAGTGCTACTGCTTCAAAATATCGGTGTTGGGTAAAAGGTCACCTTTTAACACAGTACCGATATTGTGAAGCACGTTTGCAAA
dot-bracket secondary structure
.........(((.(((((((((.(((((((((((((..(((((((...)))))))...))))))))))))).))))))).))..)))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: 454
references
[1] Grimson A, Srivastava M, Fahey B, Woodcroft BJ, Chiang HR, King N, Degnan BM, Rokhsar DS, Bartel DP, Nature. 455:1193-1197(2008)., "Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals"
ACCAATAAGTGCTACTGCTTCAAAATATCGGTGTTGGGTAAAAGGTCACCTTTTAACACAGTACCGATATTGTGAAGCACGTTTGCAAA
dot-bracket secondary structure
.........(((.(((((((((.(((((((((((((..(((((((...)))))))...))))))))))))).))))))).))..)))..
SIMILARITIES| miRBase nve-mir-2024g-3: 2e-45 PMRD no hits microPC no hits | UniProt no hits RFAM mir-2024: 1e-34 |
Identical with: nve-mir-2024g-2 from miRBase (MNEST039258) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: 454
references
[1] Grimson A, Srivastava M, Fahey B, Woodcroft BJ, Chiang HR, King N, Degnan BM, Rokhsar DS, Bartel DP, Nature. 455:1193-1197(2008)., "Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals"
