ABOUT THIS RECORDspecies: Nematostella vectensis
miRNA family: mir-2043
source: miRBase, original name: nve-mir-2043a (MI0010311)
Taxonomy by NCBI:
Nematostella vectensis Nematostella Edwardsiidae Actiniaria Hexacorallia Anthozoa Cnidaria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TACCCTCAAAAGACGGTATTAG miRNA* TATATCGCCTTTTGAGGTTATT mismatches: 3 bulges: 0 |
pre-miRNA
GTATCTGATATCGAATCTCTTATATCGCCTTTTGAGGTTATTTTCTTAATACCCTCAAAAGACGGTATTAGAGATTACACAGCTGGACA
dot-bracket secondary structure
((..(((......(((((((.((((((.(((((((((.((((.....)))).))))))))).)))))).)))))))...)))....)).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: 454
references
[1] Grimson A, Srivastava M, Fahey B, Woodcroft BJ, Chiang HR, King N, Degnan BM, Rokhsar DS, Bartel DP, Nature. 455:1193-1197(2008)., "Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals"
GTATCTGATATCGAATCTCTTATATCGCCTTTTGAGGTTATTTTCTTAATACCCTCAAAAGACGGTATTAGAGATTACACAGCTGGACA
dot-bracket secondary structure
((..(((......(((((((.((((((.(((((((((.((((.....)))).))))))))).)))))).)))))))...)))....)).
SIMILARITIES| miRBase nve-mir-2043b: 4e-43 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: 454
references
[1] Grimson A, Srivastava M, Fahey B, Woodcroft BJ, Chiang HR, King N, Degnan BM, Rokhsar DS, Bartel DP, Nature. 455:1193-1197(2008)., "Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals"
