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ABOUT THIS RECORD
ID:
MNEST039322
species:
Chlamydomonas reinhardtii
source:
miRBase, original name:
cre-MIR1142
(
MI0006203
)
Taxonomy by NCBI:
Chlamydomonas reinhardtii
Chlamydomonas
Chlamydomonadaceae
Chlamydomonadales
Chlorophyceae
Chlorophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AAGGTGTGGATGCGGCATGGG
miRNA*
CATGCCCAGACCACGCTCCAG
mismatches:
3
bulges:
2
View larger
pre-miRNA
CGTGGCAGGGGTC
AAGGTGTGGATGCGGCATGGG
TGGCTAACCCCGCC
CATGCCCAGACCACGCTCCAG
CCCCTGCCCCG
dot-bracket secondary structure
((.(((((((((.
..(((((((.((.((((((((
(((......)))))
))))))))..)))))))...)
)))))))).))
SIMILARITIES
miRBase
no hits
PMRD
cre-miR1142
:
4e-40
microPC
no hits
UniProt
no hits
RFAM
no hits
Identical with:
cre-miR1142
from PMRD (
MNEST048443
)
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
cloned
references
[
1
] Molnar A, Schwach F, Studholme DJ, Thuenemann EC, Baulcombe DC,
Nature. 447:1126-1129(2007).
,
"miRNAs control gene expression in the single-cell alga Chlamydomonas reinhardtii"