ABOUT THIS RECORDspecies: Chlamydomonas reinhardtii
source: miRBase, original name: cre-MIR1147 (MI0006208)
Taxonomy by NCBI:
Chlamydomonas reinhardtii Chlamydomonas Chlamydomonadaceae Chlamydomonadales Chlorophyceae Chlorophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGTGCCAGCGCGCTCTCGGCC miRNA* CCGAGAACGCGCTGGCACTAA mismatches: 1 bulges: 0 |
pre-miRNA
GCCATAATTAGTGCCAGCGCGCTCTCGGCCAAGTCTGGCAGAAGCGGAGGAGCCGCCGCTGCCAGACTTGGCCGAGAACGCGCTGGCACTAATTGGGGC
dot-bracket secondary structure
(((.(((((((((((((((((.(((((((((((((((((((..((((.....))))..))))))))))))))))))).))))))))))))))))).)))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Molnar A, Schwach F, Studholme DJ, Thuenemann EC, Baulcombe DC, Nature. 447:1126-1129(2007)., "miRNAs control gene expression in the single-cell alga Chlamydomonas reinhardtii"
GCCATAATTAGTGCCAGCGCGCTCTCGGCCAAGTCTGGCAGAAGCGGAGGAGCCGCCGCTGCCAGACTTGGCCGAGAACGCGCTGGCACTAATTGGGGC
dot-bracket secondary structure
(((.(((((((((((((((((.(((((((((((((((((((..((((.....))))..))))))))))))))))))).))))))))))))))))).)))
SIMILARITIES| miRBase cre-MIR1147: 2e-51 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Molnar A, Schwach F, Studholme DJ, Thuenemann EC, Baulcombe DC, Nature. 447:1126-1129(2007)., "miRNAs control gene expression in the single-cell alga Chlamydomonas reinhardtii"
