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ABOUT THIS RECORD
ID:
MNEST040493
species:
Glycine max
source:
miRBase, original name:
gma-MIR1512
(
MI0007224
)
Taxonomy by NCBI:
Glycine max
Glycine
Phaseoleae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TAACTGAAAATTCTTAAAGTAT
miRNA*
GCTTTAAGAATTTCAGTTATG
mismatches:
0
bulges:
1
View larger
pre-miRNA
TCTTGATTCC
TAACTGAAAATTCTTAAAGTAT
TCCCATCATCGAAATGAAATGAAGATTGGGAAT
GCTTTAAGAATTTCAGTTATG
CATCAATCA
dot-bracket secondary structure
..(((((.(.
(((((((((.((((((((((((
(((((((.(((........))).)).)))))))
))))))))))))))))))).)
.)))))...
SIMILARITIES
miRBase
no hits
PMRD
gma-miR1512
:
5e-49
microPC
no hits
UniProt
no hits
RFAM
no hits
Identical with:
gma-miR1512
from PMRD (
MNEST048595
)
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
454
references
[
1
] Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O,
BMC Genomics. 9:160(2008).
,
"Novel and nodulation-regulated microRNAs in soybean roots"