ABOUT THIS RECORDspecies: Sorghum bicolor
miRNA family: MIR529_2
source: miRBase, original name: sbi-MIR529 (MI0010924)
Taxonomy by NCBI:
Sorghum bicolor Sorghum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTGTACCCTCTCTCTTCTTC miRNA* AGAAGAGAGAGAGTACAGCC mismatches: 1 bulges: 0 |
pre-miRNA
GGGAGAAGAGAGAGAGTACAGCCTTACCATGTACACACACTCCAATCTCAACAGTCTCTTATATATGCTGCTGTTACCTGTGAGTGTGATGAAGGCTGTA
CCCTCTCTCTTCTTCT
dot-bracket secondary structure
((((((((((((((.((((((((((..(((.....(((((((((.....((((((..(........)..))))))...)).)))))))))))))))))))
).))))))))))))))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Zhang L, Ware D, Unpublished (2009).,
GGGAGAAGAGAGAGAGTACAGCCTTACCATGTACACACACTCCAATCTCAACAGTCTCTTATATATGCTGCTGTTACCTGTGAGTGTGATGAAGGCTGTA
CCCTCTCTCTTCTTCT
dot-bracket secondary structure
((((((((((((((.((((((((((..(((.....(((((((((.....((((((..(........)..))))))...)).)))))))))))))))))))
).))))))))))))))
SIMILARITIES| miRBase zma-MIR529: 0.0000000004 PMRD osa-miR529a: 0.000000001 microPC no hits | UniProt no hits RFAM MIR529: 0.000000007 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Zhang L, Ware D, Unpublished (2009).,
