ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIR395
source: miRBase, original name: tae-MIR395a (MI0016463)
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTGAAGTGTTTGGGGGAACTC miRNA* GTTCCTTGCAAGCACTTCATGA mismatches: 0 bulges: 1 |
pre-miRNA
CTTACAGTGGGTTCCTTGCAAGCACTTCATGAGGCATTATTAAAAATGCCACTGTGAAGTGTTTGGGGGAACTCTTG
dot-bracket secondary structure
....(((.(((((((((.(((((((((((((.((((((......)))))).).))))))))))))))))))))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Dryanova A, Zakharov A, Gulick PJ, Genome. 51:433-443(2008)., "Data mining for miRNAs and their targets in the Triticeae"
CTTACAGTGGGTTCCTTGCAAGCACTTCATGAGGCATTATTAAAAATGCCACTGTGAAGTGTTTGGGGGAACTCTTG
dot-bracket secondary structure
....(((.(((((((((.(((((((((((((.((((((......)))))).).))))))))))))))))))))))))
SIMILARITIES| miRBase bdi-MIR395c: 0.0000000000002 PMRD zma-miR395b: 0.0000002 microPC miR395: 3e-22 | UniProt no hits RFAM mir-395: 0.000004 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Dryanova A, Zakharov A, Gulick PJ, Genome. 51:433-443(2008)., "Data mining for miRNAs and their targets in the Triticeae"
