ABOUT THIS RECORDspecies: Triticum aestivum
miRNA family: MIR395
source: miRBase, original name: tae-MIR395b (MI0016464)
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGAAGTGTTTGGGGGAACTC miRNA* GTTCCTTGCAAGCACTTC mismatches: 1 bulges: 1 |
pre-miRNA
CTGAAGTGTTTGGGGGAACTCTTGGTGTCACCAAGCATTTAGTAGACATTGGCCACATATCATAAGAGAGATGCATCAATGGGCTGAATGTTTGGTCTTA
CCATGGGTTCCTTGCAAGCACTTC
dot-bracket secondary structure
..(((((((((((((((((((.(((((..((((((((((((((...((((((...(((.((......)).)))..)))))).))))))))))))))..))
))).))))))))).))))))))))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Dryanova A, Zakharov A, Gulick PJ, Genome. 51:433-443(2008)., "Data mining for miRNAs and their targets in the Triticeae"
CTGAAGTGTTTGGGGGAACTCTTGGTGTCACCAAGCATTTAGTAGACATTGGCCACATATCATAAGAGAGATGCATCAATGGGCTGAATGTTTGGTCTTA
CCATGGGTTCCTTGCAAGCACTTC
dot-bracket secondary structure
..(((((((((((((((((((.(((((..((((((((((((((...((((((...(((.((......)).)))..)))))).))))))))))))))..))
))).))))))))).))))))))))
SIMILARITIES| miRBase bdi-MIR395l: 0.0000000000004 PMRD zma-miR395b: 0.00000003 microPC miR395: 0.00000000003 | UniProt no hits RFAM mir-395: 0.000000007 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Dryanova A, Zakharov A, Gulick PJ, Genome. 51:433-443(2008)., "Data mining for miRNAs and their targets in the Triticeae"
