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ABOUT THIS RECORD

ID: MNEST042671
species: Triticum aestivum
miRNA family: MIR1138
source: miRBase, original name: tae-MIR1138 (MI0006200)

Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GCTTAGATGTGACATCCTTAAAA

miRNA*
 ATAACTATGTCACATCTAAGCTG

mismatches: 5
bulges: 0
View larger
pre-miRNA
 ATCTTGTATAGGTCTGTCTAGGACACATCTAAATGTGACATAACTATGTCACATCTAAGCTGATGTCAACTCTGTTTGTGGTCTATTTTTTTTATCCTAG
TTTTTTTATTTCTTATTGCTACATTATATATTTGTAGGAGCTTAGATGTGACATCCTTAAAAACATCTAGATGTGAATTAAACAAACTGATCTT

dot-bracket secondary structure
..........(((.(((.(((..((((((((.((((....(((..((((((((((((((((..((.(((.(.(((.((((((..................
.................))))))..))).).)))))..))))))))))))))))..)))...)))).))))))))..))).))).)))......


SIMILARITIES
miRBase no hits

PMRD tae-miR1138: 1e-42

microPC miR1138: 2e-22		UniProt no hits

RFAM no hits

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned

references
[1] Yao Y, Guo G, Ni Z, Sunkar R, Du J, Zhu JK, Sun Q, Genome Biol. 8:R96(2007)., "Cloning and characterization of microRNAs from wheat (Triticum aestivum L.)"



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