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ABOUT THIS RECORD
ID:
MNEST043998
species:
Schistosoma japonicum
source:
Huang et al., original name:
sja-miR-3086
Taxonomy by NCBI:
Schistosoma japonicum
Schistosoma
Schistosomatidae
Schistosomatoidea
Strigeidida
Digenea
Trematoda
Platyhelminthes
Acoelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCTGGACTCAGTAGTTTAGTT
miRNA*
CTCGAAACGAACTGAGTTTGAAT
mismatches:
1
bulges:
4
View larger
pre-miRNA
AGCGTAACTG
TCTGGACTCAGTAGTTTAGTT
ATGAACGCAGTGGCGTTTGA
CTCGAAACGAACTGAGTTTGAAT
CCCAGTATGGA
dot-bracket secondary structure
..((((.(((
((.(((((((((.((((((((
..((((((....))))))))
))..))))..)))))))))))..
..)))))))..
SIMILARITIES
miRBase
sja-mir-3505
:
0.000004
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
Hammerhead_1: 0.00002
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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