ABOUT THIS RECORDspecies: Schistosoma japonicum
source: Huang et al., original name: sja-miR-92
Taxonomy by NCBI:
Schistosoma japonicum Schistosoma Schistosomatidae Schistosomatoidea Strigeidida Digenea Trematoda Platyhelminthes Acoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TATTGCACTTACCTTCGCCTTG miRNA* AGGTGGATGTTAGTGCAATTTA mismatches: 5 bulges: 0 |
pre-miRNA
CATGTTTGTGAGGTGGATGTTAGTGCAATTTAGTGACGTAAATATATTGCACTTACCTTCGCCTTGCAAATATAGG
dot-bracket secondary structure
.(((((((..(((((((.((.((((((((.((..........)).)))))))).)).)))))))..)))))))...
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
CATGTTTGTGAGGTGGATGTTAGTGCAATTTAGTGACGTAAATATATTGCACTTACCTTCGCCTTGCAAATATAGG
dot-bracket secondary structure
.(((((((..(((((((.((.((((((((.((..........)).)))))))).)).)))))))..)))))))...
SIMILARITIES| miRBase sja-mir-3479: 8e-38 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
Identical with: sja-mir-3479 from miRBase (MNEST038994) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
