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ABOUT THIS RECORD
ID:
MNEST044005
species:
Schistosoma japonicum
source:
Huang et al., original name:
sja-miR-3128
Taxonomy by NCBI:
Schistosoma japonicum
Schistosoma
Schistosomatidae
Schistosomatoidea
Strigeidida
Digenea
Trematoda
Platyhelminthes
Acoelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CGGCGTCTGGACGTTTGGTTTTT
miRNA*
GTGCTGAATGTACGGAAATCGTTCGTG
mismatches:
7
bulges:
4
View larger
pre-miRNA
CTACAGCACA
CGGCGTCTGGACGTTTGGTTTTT
AGTTGCACTACTTACGCAAAGT
GTGCTGAATGTACGGAAATCGTTCGTG
ATGCACCGG
dot-bracket secondary structure
.....(((((
(((((((((.(((((..((....
..((((.........))))...
..))..))))).))))...)).)))))
.))).....
SIMILARITIES
miRBase
sja-mir-3496
:
1e-46
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
Identical with:
sja-mir-3496
from miRBase (
MNEST039019
)
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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