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ABOUT THIS RECORD
ID:
MNEST044011
species:
Schistosoma japonicum
source:
Huang et al., original name:
sja-miR-3135
Taxonomy by NCBI:
Schistosoma japonicum
Schistosoma
Schistosomatidae
Schistosomatoidea
Strigeidida
Digenea
Trematoda
Platyhelminthes
Acoelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATGAGACTCCCCAGATACGTA
miRNA*
TGTATCCGTGCTGAGATTTCGTCA
mismatches:
3
bulges:
3
View larger
pre-miRNA
AATCGAGCTTTC
TGTATCCGTGCTGAGATTTCGTCA
GTCACCAGGCCATCAGCACTG
ATGAGACTCCCCAGATACGTA
AAGCGGTCTA
dot-bracket secondary structure
......(((((.
((((((..((..(((.((((((((
((......((.....))))))
)))))))))..)))))))).)
))))......
SIMILARITIES
miRBase
sja-mir-3492
:
5e-27
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
Hammerhead_1: 0.00000000008
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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