miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST044013
species:
Schistosoma japonicum
source:
Huang et al., original name:
sja-miR-2f
Taxonomy by NCBI:
Schistosoma japonicum
Schistosoma
Schistosomatidae
Schistosomatoidea
Strigeidida
Digenea
Trematoda
Platyhelminthes
Acoelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCACAGCCAATATTGATACCCG
miRNA*
GGTGTTGATTCTGGCTGAGTTCGTGGCA
mismatches:
5
bulges:
6
View larger
pre-miRNA
CGATACCT
GGTGTTGATTCTGGCTGAGTTCGTGGCA
GGATAAAGGTTTGCCTG
TCACAGCCAATATTGATACCCG
GTGTTG
dot-bracket secondary structure
(((((((.
(((((..((..(((((......((((((
((.(((....)))))))
)))))))))..))..))))).)
))))))
SIMILARITIES
miRBase
emu-mir-2c
:
0.001
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
download this record