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ABOUT THIS RECORD

ID: MNEST044014
species: Schistosoma japonicum
source: Huang et al., original name: sja-miR-2e-5p

Taxonomy by NCBI:
Schistosoma japonicum Schistosoma Schistosomatidae Schistosomatoidea Strigeidida Digenea Trematoda Platyhelminthes Acoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ACCCTTGTTCGACTGTGATGTG

miRNA*
TATCACAGCCGTGCTTAAGGGCTT

mismatches: 4
bulges: 2

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pre-miRNA
TTCAGGCGCAACCCTTGTTCGACTGTGATGTGATTGAAATTAGCCCATATCACAGCCGTGCTTAAGGGCTTCGTCGAAACC

dot-bracket secondary structure
(((.((((...((((((..((.((((((((((.............)))))))))).))....))))))...)))))))...


SIMILARITIES
miRBase sja-mir-2c: 1e-39

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits

Identical with: sja-mir-2c from miRBase (MNEST038961)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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