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ABOUT THIS RECORD
ID:
MNEST044049
species:
Schistosoma japonicum
source:
Huang et al., original name:
sja-miR-3052
Taxonomy by NCBI:
Schistosoma japonicum
Schistosoma
Schistosomatidae
Schistosomatoidea
Strigeidida
Digenea
Trematoda
Platyhelminthes
Acoelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GCCACAACAGTTCGAGGACG
miRNA*
ACCTCAATTGGTGTCGCTG
mismatches:
4
bulges:
1
View larger
pre-miRNA
CAATTGTTCCTC
ACCTCAATTGGTGTCGCTG
ACTCTGCACGAGATGAAGGTGCGGTG
GCCACAACAGTTCGAGGACG
GGGACGTCAA
dot-bracket secondary structure
.....((((((.
.(((((((((.(((.(((.
...((((((.........)))))).)
)).))).))))).))))..)
))))).....
SIMILARITIES
miRBase
sja-mir-3489
:
3e-44
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
Identical with:
sja-miR-3079
from Huang et al. (
MNEST044048
)
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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