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ABOUT THIS RECORD
ID:
MNEST044050
species:
Schistosoma japonicum
source:
Huang et al., original name:
sja-miR-3001-a
Taxonomy by NCBI:
Schistosoma japonicum
Schistosoma
Schistosomatidae
Schistosomatoidea
Strigeidida
Digenea
Trematoda
Platyhelminthes
Acoelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCAAAATCGATTGCAATGGCT
miRNA*
CGTAACAAATGGTTAGAGA
mismatches:
5
bulges:
1
View larger
pre-miRNA
ACGGCCCCTGGTTGGGGCCCACACGATGAT
CGTAACAAATGGTTAGAGA
CTTTAGGTGATATGGC
TCAAAATCGATTGCAATGGCT
CAGGTGCATC
dot-bracket secondary structure
..((((((.....))))))..(((..((((
(((..(((.(((((.(((.
((.((.....)).)))
))..))))).)))..)))).)
)).)))....
SIMILARITIES
miRBase
sja-mir-3495
:
0.00000007
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
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