ABOUT THIS RECORDspecies: Schistosoma japonicum
source: Huang et al., original name: sja-miR-3108
Taxonomy by NCBI:
Schistosoma japonicum Schistosoma Schistosomatidae Schistosomatoidea Strigeidida Digenea Trematoda Platyhelminthes Acoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGGTCGAGGTAGACGGTGGT miRNA* CACTCCTAGCTTACTTCCAGC mismatches: 4 bulges: 3 |
pre-miRNA
TTTTCGTTTGGCCACTCCTAGCTTACTTCCAGCCTACTACTCTTACAACAGACAACATTTCTGGTCGAGGTAGACGGTGGTCAGGCATACG
dot-bracket secondary structure
.....(((((((((((.(((.(((....((((........(((......)))........))))..))).)))..))))))))))).....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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TTTTCGTTTGGCCACTCCTAGCTTACTTCCAGCCTACTACTCTTACAACAGACAACATTTCTGGTCGAGGTAGACGGTGGTCAGGCATACG
dot-bracket secondary structure
.....(((((((((((.(((.(((....((((........(((......)))........))))..))).)))..))))))))))).....
SIMILARITIES| miRBase sja-mir-3483: 0.0003 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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