ABOUT THIS RECORDspecies: Schistosoma japonicum
source: Huang et al., original name: sja-miR-3021
Taxonomy by NCBI:
Schistosoma japonicum Schistosoma Schistosomatidae Schistosomatoidea Strigeidida Digenea Trematoda Platyhelminthes Acoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGATAGAGAGGTGTCAGGATTTTT miRNA* TGGGGGAGGGACCTCTTTCCAT mismatches: 8 bulges: 2 |
pre-miRNA
TTCGTGATGCGGTTGGGGGAGGGACCTCTTTCCATTATCCTATCTGAAATCCGGGATGAATGAGATAGAGAGGTGTCAGGATTTTTTGCATCCAAA
dot-bracket secondary structure
...(.(((((((..((....((.((((((((((((((((((...........)))))).))).))..))))))).))....))..))))))))...
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
TTCGTGATGCGGTTGGGGGAGGGACCTCTTTCCATTATCCTATCTGAAATCCGGGATGAATGAGATAGAGAGGTGTCAGGATTTTTTGCATCCAAA
dot-bracket secondary structure
...(.(((((((..((....((.((((((((((((((((((...........)))))).))).))..))))))).))....))..))))))))...
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
