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ABOUT THIS RECORD
ID:
MNEST044084
species:
Schistosoma japonicum
source:
Huang et al., original name:
sja-miR-3139
Taxonomy by NCBI:
Schistosoma japonicum
Schistosoma
Schistosomatidae
Schistosomatoidea
Strigeidida
Digenea
Trematoda
Platyhelminthes
Acoelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GGTTATATCTAGGAGCATGTTT
miRNA*
GCGAGGCTCCTGGTAGAAAGTC
mismatches:
6
bulges:
2
View larger
pre-miRNA
TCTAAGTCAGTAA
GCGAGGCTCCTGGTAGAAAGTC
AACTCCTGAAAAGTCAGACGAAGACAT
GGTTATATCTAGGAGCATGTTT
ATGACAAAAT
dot-bracket secondary structure
.....((((.(((
(((..((((((((...((.(((
..(..((((....))))..)..)))..
..))....)))))))).)))))
))))).....
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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