ABOUT THIS RECORDspecies: Schistosoma japonicum
source: Huang et al., original name: sja-miR-3124
Taxonomy by NCBI:
Schistosoma japonicum Schistosoma Schistosomatidae Schistosomatoidea Strigeidida Digenea Trematoda Platyhelminthes Acoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTTGGTACTATGAATGCAGT miRNA* GGGGACATTCGTGAAACCGAAGG mismatches: 3 bulges: 3 |
pre-miRNA
TTGAAAGGTAGCGGGGACATTCGTGAAACCGAAGGGTATTACCTGGAATTCATACAACCCATTTGGTACTATGAATGCAGTTTTCTTTCTA
dot-bracket secondary structure
..((((((.(((...(.((((((((..((((((((((...................)))).))))))..))))))))).))).))))))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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TTGAAAGGTAGCGGGGACATTCGTGAAACCGAAGGGTATTACCTGGAATTCATACAACCCATTTGGTACTATGAATGCAGTTTTCTTTCTA
dot-bracket secondary structure
..((((((.(((...(.((((((((..((((((((((...................)))).))))))..))))))))).))).))))))..
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|Q7LHG5|YI31B_YEAST: 0.0004 RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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