ABOUT THIS RECORDspecies: Schistosoma mansoni
source: Huang et al., original name: sma-miR-3050
Taxonomy by NCBI:
Schistosoma mansoni Schistosoma Schistosomatidae Schistosomatoidea Strigeidida Digenea Trematoda Platyhelminthes Acoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GATAGAAGATTGCCGCTCGTAC miRNA* ACGAGCAAGCATTCGTTTACGCT mismatches: 6 bulges: 1 |
pre-miRNA
TGAGATGCTCGATAGAAGATTGCCGCTCGTACTTGAATACATGTTTAGACTCGGATCATGCTTTAATACGAGCAAGCATTCGTTTACGCTTCAGT
dot-bracket secondary structure
...((.((....((((.((.(((.(((((((.(((((..(((((((......))).)))).))))))))))))..))).)).)))).)).))...
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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TGAGATGCTCGATAGAAGATTGCCGCTCGTACTTGAATACATGTTTAGACTCGGATCATGCTTTAATACGAGCAAGCATTCGTTTACGCTTCAGT
dot-bracket secondary structure
...((.((....((((.((.(((.(((((((.(((((..(((((((......))).)))).))))))))))))..))).)).)))).)).))...
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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