ABOUT THIS RECORDspecies: Schistosoma japonicum
source: Hao et al., original name: sja-Novel-16
Taxonomy by NCBI:
Schistosoma japonicum Schistosoma Schistosomatidae Schistosomatoidea Strigeidida Digenea Trematoda Platyhelminthes Acoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGATATGTATGGGTTACTTGGT miRNA* CAGTGACCAGACATATCCCT mismatches: 3 bulges: 2 |
pre-miRNA
CGATGTGATATGTATGGGTTACTTGGTGTCAGCGGATAACATGTTTTATTCGCCATTAAGCAATACACCAGTGACCAGACATATCCCTATCG
dot-bracket secondary structure
(((((.(((((((...(((((((.(((((..((((((((......))))))))...........))))))))))))..)))))))..)))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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CGATGTGATATGTATGGGTTACTTGGTGTCAGCGGATAACATGTTTTATTCGCCATTAAGCAATACACCAGTGACCAGACATATCCCTATCG
dot-bracket secondary structure
(((((.(((((((...(((((((.(((((..((((((((......))))))))...........))))))))))))..)))))))..)))))
SIMILARITIES| miRBase sja-mir-190: 3e-47 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
Identical with: sja-mir-190 from miRBase (MNEST038986) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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