ABOUT THIS RECORDspecies: Schistosoma japonicum
source: Hao et al., original name: sja-Novel-147
Taxonomy by NCBI:
Schistosoma japonicum Schistosoma Schistosomatidae Schistosomatoidea Strigeidida Digenea Trematoda Platyhelminthes Acoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGGCAAGATTACGGCGAAGCT miRNA* CTTCACTTTATTTTGCCAAT mismatches: 3 bulges: 1 |
pre-miRNA
ATGCTATTTGTTGTTGGCAAGATTACGGCGAAGCTGAATCAAATTTAAAATGTTTCAGCTTCACTTTATTTTGCCAATAAAGGTAGCAT
dot-bracket secondary structure
(((((((((.(((((((((((((...((.(((((((((.((.........)).))))))))).))..))))))))))))))))))))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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ATGCTATTTGTTGTTGGCAAGATTACGGCGAAGCTGAATCAAATTTAAAATGTTTCAGCTTCACTTTATTTTGCCAATAAAGGTAGCAT
dot-bracket secondary structure
(((((((((.(((((((((((((...((.(((((((((.((.........)).))))))))).))..))))))))))))))))))))))
SIMILARITIES| miRBase sja-mir-31: 7e-42 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
Identical with: sja-miR-31 from Huang et al. (MNEST044053) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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