ABOUT THIS RECORDspecies: Triticum aestivum
source: microPC, original name: miR530
Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGCATTTGCACCTGCACCT miRNA* GTGCAGTGGGNCATGCA mismatches: 6 bulges: 2 |
pre-miRNA
TGCATTTGCACCTGCACCTGCGACNAAANAACAAANGAAACGCTTTTTGTCCCCCTCAAGTTGCTANGTGCAGTGGGNCATGCA
dot-bracket secondary structure
.(((..(.(((.(((((..(((((......(((((..........))))).........)))))...)))))))).)...))).
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
degradome data
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TGCATTTGCACCTGCACCTGCGACNAAANAACAAANGAAACGCTTTTTGTCCCCCTCAAGTTGCTANGTGCAGTGGGNCATGCA
dot-bracket secondary structure
.(((..(.(((.(((((..(((((......(((((..........))))).........)))))...)))))))).)...))).
SIMILARITIES| miRBase osa-MIR530: 0.001 PMRD ptc-miRf11026-akr: 0.001 microPC miR1030: 0.001 | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions
non-miRNEST targets: none
degradome data
download this record
